General Information of the Compound
Compound ID
CP0004259
Compound Name
4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)vinyl]benzoic acid
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Synonyms
3-methyl-TTNEB
4-(1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydro-2-naphthyl)ethenyl)benzoic acid
4-(1-(5,6,7,8-Tetrahydro-3,5,5,8,8-pentamethyl-2-naphthalenyl)ethenyl)benzoic acid
4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)ethenyl]benzoic acid
4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)vinyl]benzoic acid
4-[1-(3,5,5,8,8-pentamethyl-6,7-dihydronaphthalen-2-yl)ethenyl]benzoic acid
4-[1-3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydro-2-naphthaleneyl)vinyl]benzene carboxylic acid
9RA
Bexarotene
Bexarotene (USAN/INN)
Bexarotene [USAN]
Bexaroteno
Bexarotenum
Elan brand of bexarotene;Ligand brand of bexarotene
LG 1069
LG-100069
LG100069
LG1069
LG69 compound
LGD 1069
LGD-1069
LGD1069
P-(1-(5,6,7,8-Tetrahydro-3,5,5,8,8-pentamethyl-2-naphthyl)vinyl)benzoic acid
Targret
Targretin
Targretin (TN)
Targretin-gel
Targretyn
Targrexin
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Structure
Formula
C24H28O2
Molecular Weight
348.486
Canonical SMILES
Cc1cc2c(cc1C(=C)c1ccc(cc1)C(O)=O)C(C)(C)CCC2(C)C
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InChI
InChI=1S/C24H28O2/c1-15-13-20-21(24(5,6)12-11-23(20,3)4)14-19(15)16(2)17-7-9-18(10-8-17)22(25)26/h7-10,13-14H,2,11-12H2,1,3-6H3,(H,25,26)
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InChIKey
NAVMQTYZDKMPEU-UHFFFAOYSA-N
CAS
153559-49-0
Physicochemical Property
logP
6.10372
Rotatable Bonds
3
Heavy Atom Count
26
Polar Areas
37.3
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
1
Complexity
26

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 82146
SID: 87550948
ChEMBL ID
CHEMBL1023
DrugBank ID
DB00307
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT02999, Cytochrome P450 26A1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 13500 nM
   TI
   LI
   LO
   TS
Protein ID: PT06165, Cytochrome P450 26B1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 5900 nM
   TI
   LI
   LO
   TS
Protein ID: PT01475, Retinoic acid receptor alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 6 nM
   TI
   LI
   LO
   TS
2
EC50 > 10000 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 > 10000 nM
2 Kd > 1000 nM
3 Ki = 180 nM
4 Ki = 5453 nM
5 Ki > 1000 nM
Protein ID: PT01452, Retinoic acid receptor beta
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 282 nM
   TI
   LI
   LO
   TS
2
EC50 > 10000 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 > 10000 nM
2 Kd > 1000 nM
3 Ki = 50 nM
4 Ki = 5353 nM
5 Ki > 550 nM
6 Ki > 800 nM
7 Ki > 1000 nM
Protein ID: PT01806, Retinoic acid receptor gamma
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 648 nM
   TI
   LI
   LO
   TS
2
EC50 > 10000 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 > 10000 nM
2 Ki = 130 nM
3 Ki = 3206 nM
4 Ki > 1000 nM
Protein ID: PT01930, Retinoic acid receptor RXR-alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000109 COS-1 Chlorocebus aethiops (Green monkey)  1
1
EC50 = 20 nM
   TI
   LI
   LO
   TS
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  3
1
EC50 = 28 nM
   TI
   LI
   LO
   TS
2
EC50 = 33 nM
   TI
   LI
   LO
   TS
3
EC50 = 118 nM
   TI
   LI
   LO
   TS
CL000006 HEK293 Homo sapiens (Human)  1
1
EC50 = 40 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 33 nM
2 EC50 = 42 nM
3 Kd = 14 nM
4 Kd = 26 nM
5 Kd = 36 nM
6 Kd = 210 nM
7 Kd = 1590 nM
8 Kd = 1890 nM
9 Ki = 14 nM
10 Ki = 16 nM
11 Ki = 36 nM
12 Ki = 150 nM
13 Ki = 379 nM
Protein ID: PT03152, Retinoic acid receptor RXR-alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  1
1
EC50 = 40 nM
   TI
   LI
   LO
   TS
Protein ID: PT04149, Retinoic acid receptor RXR-alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000184 RK3E Rattus norvegicus (Rat)  1
1
EC50 = 40 nM
   TI
   LI
   LO
   TS
Protein ID: PT02538, Retinoic acid receptor RXR-beta
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 24 nM
   TI
   LI
   LO
   TS
2
EC50 = 25 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 Kd = 21 nM
2 Ki = 21 nM
Protein ID: PT01474, Retinoic acid receptor RXR-beta
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 24 nM
   TI
   LI
   LO
   TS
2
EC50 = 25 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 24 nM
2 EC50 = 112 nM
3 Ki = 5.9 nM
4 Ki = 21 nM
Protein ID: PT02769, Retinoic acid receptor RXR-gamma
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 20 nM
   TI
   LI
   LO
   TS
2
EC50 = 25 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 25 nM
2 EC50 = 122 nM
3 Ki = 8.3 nM
4 Ki = 29 nM
5 Ki = 75 nM
Protein ID: PT02226, Retinoic acid receptor RXR-gamma
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000044 CV-1 Chlorocebus aethiops (Green monkey)  2
1
EC50 = 20 nM
   TI
   LI
   LO
   TS
2
EC50 = 25 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 Kd = 29 nM
2 Ki = 29 nM
Clinical Information about the Compound
Drug 1 ( Bexarotene )
Drug Name Bexarotene
Company Eisai Inc
Indication
Cutaneous T-cell lymphoma
Approved
Target(s)
Retinoic acid receptor RXR-alpha (RXRA)
Modulator