General Information of the Compound
Compound ID
CP0041493
Compound Name
Clobenpropit
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Synonyms
145231-45-4
3-(1H-imidazol-4-yl)propyl ((4-chlorophenyl)methyl)carbamimidothioate
3-(1H-imidazol-4-yl)propyl N-(4-chlorobenzyl)carbamimidothioate
3-(1h-imidazol-5-yl)propyl n'-(4-chlorobenzyl)carbamimidothioate
CHEBI:64177
Carbamimidothioic acid, ((4-chlorophenyl)methyl)-, 3-(1H-imidazol-4-yl)propyl ester
Carbamimidothioic acid,N-[(4-chlorophenyl)methyl]-, 3-(1H-imidazol-5-yl)propyl ester
Clobenpropit
RKU631JF4H
S-(3-(4(5)-Imidazolyl))propyl-N-(4-chlorobenzyl)isothiourea
UNII-RKU631JF4H
Vuf 9153
Vuf-9153
clobenpropit
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Structure
Formula
C14H17ClN4S
Molecular Weight
308.838
Canonical SMILES
NC(SCCCc1cnc[nH]1)=NCc1ccc(Cl)cc1
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InChI
InChI=1S/C14H17ClN4S/c15-12-5-3-11(4-6-12)8-18-14(16)20-7-1-2-13-9-17-10-19-13/h3-6,9-10H,1-2,7-8H2,(H2,16,18)(H,17,19)
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InChIKey
UCAIEVHKDLMIFL-UHFFFAOYSA-N
CAS
145231-45-4
Physicochemical Property
logP
3.2438
Rotatable Bonds
6
Heavy Atom Count
20
Polar Areas
67.06
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Complexity
20

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 2790
SID: 14825609
ChEMBL ID
CHEMBL14690
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT03665, Histamine H3 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  2
1
EC50 = 1.7 nM
   TI
   LI
   LO
   TS
2
Ki = 0.6 nM
   TI
   LI
   LO
   TS
CL000156 HT-1080 Homo sapiens (Human)  1
1
IC50 = 1 nM
   TI
   LI
   LO
   TS
Protein ID: PT01194, Histamine H3 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000011 CHO Cricetulus griseus (Chinese hamster)  5
1
IC50 = 0.7943 nM
   TI
   LI
   LO
   TS
2
Kd = 0.1 nM
   TI
   LI
   LO
   TS
3
Ki = 0.3388 nM
   TI
   LI
   LO
   TS
4
Ki = 0.58 nM
   TI
   LI
   LO
   TS
5
Ki = 2.4 nM
   TI
   LI
   LO
   TS
CL000156 HT-1080 Homo sapiens (Human)  1
1
IC50 = 1 nM
   TI
   LI
   LO
   TS
CL000006 HEK293 Homo sapiens (Human)  4
1
IC50 = 1.15 nM
   TI
   LI
   LO
   TS
2
Ki = 0.5012 nM
   TI
   LI
   LO
   TS
3
Ki = 2.4 nM
   TI
   LI
   LO
   TS
4
Ki = 2.818 nM
   TI
   LI
   LO
   TS
CL000025 HEK-293T Homo sapiens (Human)  3
1
Ki = 0.2512 nM
   TI
   LI
   LO
   TS
2
Ki = 0.3388 nM
   TI
   LI
   LO
   TS
3
Ki = 2.512 nM
   TI
   LI
   LO
   TS
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
Ki = 0.5012 nM
   TI
   LI
   LO
   TS
CL000026 CHO-K1 Cricetulus griseus (Chinese hamster)  1
1
Ki = 2.4 nM
   TI
   LI
   LO
   TS
CL000074 SK-N-MC Homo sapiens (Human)  2
1
Ki = 2.512 nM
   TI
   LI
   LO
   TS
2
Ki = 3.162 nM
   TI
   LI
   LO
   TS
Protein ID: PT01173, Histamine H3 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000026 CHO-K1 Cricetulus griseus (Chinese hamster)  1
1
Ki = 1.4 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 Ki = 0.18 nM
Protein ID: PT01711, Histamine H4 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  7
1
Ki = 1 nM
   TI
   LI
   LO
   TS
2
Ki = 1.585 nM
   TI
   LI
   LO
   TS
3
Ki = 2.512 nM
   TI
   LI
   LO
   TS
4
Ki = 4.3 nM
   TI
   LI
   LO
   TS
5
Ki = 10 nM
   TI
   LI
   LO
   TS
6
Ki = 15.85 nM
   TI
   LI
   LO
   TS
7
Ki = 50.12 nM
   TI
   LI
   LO
   TS
CL000074 SK-N-MC Homo sapiens (Human)  3
1
Ki = 5 nM
   TI
   LI
   LO
   TS
2
Ki = 10 nM
   TI
   LI
   LO
   TS
3
Ki = 50.12 nM
   TI
   LI
   LO
   TS
CL000025 HEK-293T Homo sapiens (Human)  3
1
Ki = 39.81 nM
   TI
   LI
   LO
   TS
2
Ki = 50.12 nM
   TI
   LI
   LO
   TS
3
Ki = 77.62 nM
   TI
   LI
   LO
   TS
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
Ki = 50.12 nM
   TI
   LI
   LO
   TS
CL000909 HEK293T-SF-His6-CRE-Luc Homo sapiens (Human)  1
1
Ki = 50.12 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 22.39 nM
Protein ID: PT04730, Histamine H4 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000025 HEK-293T Homo sapiens (Human)  1
1
Ki = 123.03 nM
   TI
   LI
   LO
   TS
CL000909 HEK293T-SF-His6-CRE-Luc Homo sapiens (Human)  1
1
Ki = 158.49 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 851.14 nM
Clinical Information about the Compound
Drug 1 ( Clobenpropit )
Drug Name Clobenpropit
Target(s)
Histamine H4 receptor (H4R)
Agonist
Histamine H3 receptor (H3R)
Antagonist