General Information of the Compound
Compound ID
CP0036368
Compound Name
(2S)-2-{[4-(2-{2-amino-4-oxo-1H,4H,7H-pyrrolo[2,3-d]pyrimidin-5-yl}ethyl)phenyl]formamido}pentanedioic acid
    Show/Hide
Synonyms
(2R)-2-[[4-[2-(2-amino-4-oxo-1,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl]amino]pentanedioic acid
(2S)-2-[[4-[2-(2-amino-4-oxo-1,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl]amino]pentanedioic acid
2-[[4-[2-(2-amino-4-oxo-1,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl]amino]pentanedioic acid
2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID
Alimta
Alimta (TN)
LY 231,514
LY 231514
LY-231,514
LY-2315
LY-231514
LY231514
LYA
N-(4-(2-(2-Amino-3,4-dihydro-4-oxo-7H-pyrrolo(2,3-d)pyrimdin-5-yl)ethyl)benzoyl)glutamic acid
N-{4-[2-(2-amino-4-oxo-4,7-dihydro-1h-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}-d-glutamic acid
Pemetrexed
Pemetrexed (INN)
Pemetrexed [INN:BAN]
    Show/Hide
Structure
Formula
C20H21N5O6
Molecular Weight
427.417
Canonical SMILES
Nc1nc2[nH]cc(CCc3ccc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)c2c(=O)[nH]1
    Show/Hide
InChI
InChI=1S/C20H21N5O6/c21-20-24-16-15(18(29)25-20)12(9-22-16)6-3-10-1-4-11(5-2-10)17(28)23-13(19(30)31)7-8-14(26)27/h1-2,4-5,9,13H,3,6-8H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29)/t13-/m0/s1
    Show/Hide
InChIKey
WBXPDJSOTKVWSJ-ZDUSSCGKSA-N
CAS
137281-23-3
Physicochemical Property
logP
0.6664
Rotatable Bonds
9
Heavy Atom Count
31
Polar Areas
191.26
Hydrogen Bond Donor Count
6
Hydrogen Bond Acceptor Count
6
Complexity
31

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

    Show/Hide
Click to Show/Hide the External Link(s) of This Compound
PubChem ID
CID: 135410875
SID: 14758615
ChEMBL ID
CHEMBL225072
DrugBank ID
DB00642
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT01651, Dihydrofolate reductase
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000220 KB Homo sapiens (Human)  2
1
IC50 = 68 nM
   TI
   LI
   LO
   TS
2
IC50 = 327 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 1400 nM
2 IC50 = 1500 nM
3 IC50 = 2300 nM
4 IC50 = 6600 nM
5 IC50 = 66000 nM
6 Ki = 7 nM
7 Ki = 7.2 nM
Protein ID: PT04881, Folate receptor alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000938 Chinese hamster RT16 Cricetulus griseus (Chinese hamster)  3
1
IC50 = 42 nM
   TI
   LI
   LO
   TS
2
IC50 = 388 nM
   TI
   LI
   LO
   TS
3
IC50 = 894 nM
   TI
   LI
   LO
   TS
Protein ID: PT06045, Folate receptor beta
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000344 D4 [Mouse hybridoma against human RICTOR] Mus musculus (Mouse)  2
1
IC50 = 60 nM
   TI
   LI
   LO
   TS
2
IC50 = 254 nM
   TI
   LI
   LO
   TS
CL000853 HeLa R1-11 Homo sapiens (Human)  1
1
IC50 = 863 nM
   TI
   LI
   LO
   TS
Protein ID: PT05580, Proton-coupled folate transporter
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000937 R2/PCFT4 Cricetulus griseus (Chinese hamster)  3
1
IC50 = 13.2 nM
   TI
   LI
   LO
   TS
2
Ki = 94 nM
   TI
   LI
   LO
   TS
3
Ki = 259 nM
   TI
   LI
   LO
   TS
CL000853 HeLa R1-11 Homo sapiens (Human)  1
1
IC50 = 66.8 nM
   TI
   LI
   LO
   TS
CL000330 CHO Pro-4 MtxRII OuaR-2-4 Cricetulus griseus (Chinese hamster)  4
1
Ki = 94 nM
   TI
   LI
   LO
   TS
2
Ki = 96 nM
   TI
   LI
   LO
   TS
3
Ki = 1540 nM
   TI
   LI
   LO
   TS
4
Ki = 2540 nM
   TI
   LI
   LO
   TS
Protein ID: PT05723, Reduced folate transporter
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000853 HeLa R1-11 Homo sapiens (Human)  1
1
IC50 = 23.8 nM
   TI
   LI
   LO
   TS
CL001007 Chinese hamster PC43-10 Cricetulus griseus (Chinese hamster)  1
1
IC50 = 138 nM
   TI
   LI
   LO
   TS
Protein ID: PT01873, Trifunctional purine biosynthetic protein adenosine-3
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000220 KB Homo sapiens (Human)  3
1
IC50 = 11.74 nM
   TI
   LI
   LO
   TS
2
IC50 = 30 nM
   TI
   LI
   LO
   TS
3
IC50 = 30000 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 Ki = 65 nM
2 Ki = 380 nM
3 Ki = 1000 nM
Cell Viability or Cytotoxicity Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000220 KB Homo sapiens (Human)  2
1
IC50 = 68 nM
   TI
   LI
   LO
   TS
2
IC50 = 327 nM
   TI
   LI
   LO
   TS
CL000330 CHO Pro-4 MtxRII OuaR-2-4 Cricetulus griseus (Chinese hamster)  1
1
IC50 = 894 nM
   TI
   LI
   LO
   TS
Clinical Information about the Compound
Drug 1 ( Pemetrexed )
Drug Name Pemetrexed
Company Eli Lilly
Indication
Malignant pleural mesothelioma
Approved