General Information of the Compound
Compound ID
CP0451721
Compound Name
(1S,7R,10S,16E,21R)-7-benzyl-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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Structure
Formula
C26H34N4O6S2
Molecular Weight
562.714
Canonical SMILES
CC(C)[C@H]1NC(=O)C[C@@H]2OC(=O)CNC(=O)[C@@H](Cc3ccccc3)NC(=O)[C@@H](CSSCC\C=C\2)NC1=O
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InChI
InChI=1S/C26H34N4O6S2/c1-16(2)23-26(35)29-20-15-38-37-11-7-6-10-18(13-21(31)30-23)36-22(32)14-27-24(33)19(28-25(20)34)12-17-8-4-3-5-9-17/h3-6,8-10,16,18-20,23H,7,11-15H2,1-2H3,(H,27,33)(H,28,34)(H,29,35)(H,30,31)/b10-6+/t18-,19-,20-,23-/m1/s1
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InChIKey
RTUUWGNYWYQPCL-YMLJOGPASA-N
Physicochemical Property
logP
1.1125
Rotatable Bonds
3
Heavy Atom Count
38
Polar Areas
142.7
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
8
Complexity
38

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 71542605
SID: 163541180
ChEMBL ID
CHEMBL4746359
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000025 HEK-293T Homo sapiens (Human)  1
1
IC50 = 0.54 nM
   TI
   LI
   LO
   TS
Protein ID: PT03064, Histone deacetylase 6
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000025 HEK-293T Homo sapiens (Human)  1
1
IC50 = 54.9 nM
   TI
   LI
   LO
   TS
Cell Viability or Cytotoxicity Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000007 HT-29 Homo sapiens (Human)  1
1
GI50 = 3 nM
   TI
   LI
   LO
   TS
CL000111 MDA-MB-231 Homo sapiens (Human)  1
1
GI50 = 8.7 nM
   TI
   LI
   LO
   TS
CL000117 SF539 Homo sapiens (Human)  1
1
GI50 = 3.3 nM
   TI
   LI
   LO
   TS
CL000413 MKN45 Homo sapiens (Human)  1
1
GI50 = 64 nM
   TI
   LI
   LO
   TS
CL000561 LOX-IMVI Homo sapiens (Human)  1
1
GI50 = 2.2 nM
   TI
   LI
   LO
   TS
CL000964 NCI-H522 Homo sapiens (Human)  1
1
GI50 = 0.72 nM
   TI
   LI
   LO
   TS