Brief Information of the Cell Line and Protein
Cell Line ID: CL000025 , HEK-293T
Synonyms
Hek293T
HEK-293T
HEK 293T
HEK-293-T
HEK 293 T
293-T
293 T
293T
Human Embryonic Kidney 293T
293tsA1609neo
Category Transformed cell line
Organism
Homo sapiens (Human)
Cellosaurus ID
CVCL_0063
Protein ID: PT03064 , Histone deacetylase 6
Gene Name HDAC6
Organism Mus musculus, Mouse
Protein Classification Epigenetic regulator
Uniprot ID Q9Z2V5
Table of Molecular Bioactivities Related to the Cell Line and Protein
Cell Line ID: CL000025  Protein ID: PT03064
 
Compound ID Compound Name Compound Formula
CP0005479
CHEBI:46024
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C17H22N2O3
 2
1
IC50 = 2.8 nM
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2
IC50 = 28 nM
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CP0454008
(3'S,9'S,12'R)-3'-methyl-9'-[5-(pyridin-2-yldisulfanyl)pentyl]spiro[1,3-dihydroindene-2,6'-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane]-2',5',8',11'-tetrone
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C30H37N5O4S2
 1
1
IC50 = 8.8 nM
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CP0421823
(3S,3'S,9'S,12'R)-3'-methyl-9'-[5-(pyridin-2-yldisulfanyl)pentyl]spiro[1,2-dihydroindene-3,6'-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane]-2',5',8',11'-tetrone
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C30H37N5O4S2
 1
1
IC50 = 12 nM
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CP0410385
6-[(3S,6R,9S,12R)-3-[(2S)-butan-2-yl]-6-[(4-methoxyphenyl)methyl]-2,5,8,11-tetraoxo-1,4,7,10-tetrazabicyclo[10.3.0]pentadecan-9-yl]-N-hydroxyhexanamide
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C29H43N5O7
 1
1
IC50 = 13 nM
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CP0527020
(3S,9S,12R)-6,6-dimethyl-3-(phenylmethoxymethyl)-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C31H41N5O5S2
 1
1
IC50 = 24 nM
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CP0496587
(3S,9S,12R)-3-(hydroxymethyl)-6,6-dimethyl-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C24H35N5O5S2
 1
1
IC50 = 26 nM
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CP0459854
(3S,9S,12R)-3,6,6-trimethyl-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazatricyclo[10.8.0.014,19]icosa-14,16,18-triene-5,8,11-trione
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C29H39N5O3S2
 1
1
IC50 = 29 nM
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CP0421825
(3R,3'S,9'S,12'R)-3'-methyl-9'-[5-(pyridin-2-yldisulfanyl)pentyl]spiro[1,2-dihydroindene-3,6'-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane]-2',5',8',11'-tetrone
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C30H37N5O4S2
 1
1
IC50 = 33 nM
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CP0449109
(3S,9S,12R)-6,6-dimethyl-3-(2-phenylethyl)-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C31H41N5O4S2
 1
1
IC50 = 36 nM
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CP0455085
(5S,11S,13aR)-5-benzyl-8,8-dimethyl-11-[5-(pyridin-2-yldisulfanyl)-pentyl]-decahydro-3a,6,9,12-tetraaza-cyclopentacyclododecene-4,7,10,13-tetraone
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C30H39N5O4S2
 1
1
IC50 = 40 nM
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CP0421827
(5S,11S,13aR)-5,8,8-trimethyl-11-[5-(pyridin-2-yldisulfanyl)-pentyl]-decahydro-3a,6,9,12-tetraaza-cyclopetacyclododecene-4,7,10,13-tetraone
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C24H35N5O4S2
 1
1
IC50 = 43 nM
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CP0459853
(3S,9S,12R)-6,6-dimethyl-3-(3-phenylpropyl)-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C32H43N5O4S2
 1
1
IC50 = 43 nM
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CP0517983
N-[4-[2-[(2S,3S,5S)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyoctanediamide
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C34H52N4O7S2Si
 1
1
IC50 = 44 nM
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CP0176598
N-[4-[2-[(2S,3S,5R)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyoctanediamide
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C34H52N4O7S2Si
 1
1
IC50 = 51 nM
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CP0451721
(1S,7R,10S,16E,21R)-7-benzyl-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C26H34N4O6S2
 1
1
IC50 = 54.9 nM
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CP0457519
(3S,6S,9S,12R)-6-benzyl-3,6-dimethyl-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C30H39N5O4S2
 1
1
IC50 = 56 nM
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CP0461617
(3S,6R,9S,12R)-6-benzyl-3,6-dimethyl-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C30H39N5O4S2
 1
1
IC50 = 71 nM
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CP0566736
N-[4-[2-[(2S,3S,5S)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyheptanediamide
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C33H50N4O7S2Si
 1
1
IC50 = 81 nM
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CP0433216
(3S,9S,12R)-6,6-dimethyl-3-phenyl-9-[5-(pyridin-2-yldisulfanyl)pentyl]-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone
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C29H37N5O4S2
 1
1
IC50 = 86 nM
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CP0085832
(1R,4S,7Z,10S,16E,21R)-7-ethylidene-4,21-di(propan-2-yl)-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C24H36N4O6S2
 1
1
IC50 = 109 nM
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CP0517982
N-[4-[2-[(2S,3S,5R)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyheptanediamide
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C33H50N4O7S2Si
 1
1
IC50 = 110 nM
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CP0574539
4-[(4-benzhydrylpiperazin-1-yl)methyl]-N-hydroxybenzamide
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C25H27N3O2
 1
1
IC50 = 110 nM
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CP0410386
N-hydroxy-6-[(3S,6S,9S,12R)-2,5,8,11-tetraoxo-3,6-dipentyl-1,4,7,10-tetrazabicyclo[10.3.0]pentadecan-9-yl]hexanamide
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C27H47N5O6
 1
1
IC50 = 140 nM
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CP0429069
N-hydroxy-6-[(1S,7R,10S,13S)-2,8,11,25-tetraoxo-3,9,12,24-tetrazatricyclo[11.10.2.03,7]pentacosan-10-yl]hexanamide
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C27H45N5O6
 1
1
IC50 = 230 nM
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CP0513089
N-hydroxy-6-[(1S,7R,10S,13R)-2,8,11,25-tetraoxo-16,21-dioxa-3,9,12,24-tetrazatricyclo[11.10.2.03,7]pentacosan-10-yl]hexanamide
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C25H41N5O8
 1
1
IC50 = 240 nM
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CP0568004
4-[(4-benzylpiperazin-1-yl)methyl]-N-hydroxybenzamide
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C19H23N3O2
 1
1
IC50 = 260 nM
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CP0569263
N-hydroxy-4-[[4-(1-phenylethyl)piperazin-1-yl]methyl]benzamide
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C20H25N3O2
 1
1
IC50 = 260 nM
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CP0567999
4-[2-(4-benzhydrylpiperazin-1-yl)ethyl]-N-hydroxybenzamide
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C26H29N3O2
 1
1
IC50 = 330 nM
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CP0281994
6-((5S,8R,11S,13aR)-4,7,10,13-Tetraoxo-5,8-dipentyl-tetradecahydro-3a,6,9,12-tetraaza-cyclopentacyclododecen-11-yl)-hexanoic acid hydroxyamide
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C27H47N5O6
 1
1
IC50 = 340 nM
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CP0557086
(1S,7S,10S,16E,21R)-7-benzyl-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C26H34N4O6S2
 1
1
IC50 = 355 nM
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CP0281997
6-((1S,7R,10S,13R)-2,8,11,25-Tetraoxo-3,9,12,24-tetraaza-tricyclo[11.10.2.0*3,7*]pentacos-10-yl)-hexanoic acid hydroxyamide
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C27H45N5O6
 1
1
IC50 = 410 nM
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CP0569621
4-[4-(4-benzhydrylpiperazin-1-yl)butyl]-N-hydroxybenzamide
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C28H33N3O2
 1
1
IC50 = 430 nM
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CP0429068
N-hydroxy-6-[(1S,4R,10S,13R)-3,9,12,24-tetraoxo-2,8,11,25-tetrazatricyclo[11.10.2.04,8]pentacosan-10-yl]hexanamide
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C27H45N5O6
 1
1
IC50 = 490 nM
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CP0405350
N-[4-[2-[(2S,3S,5R)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyhexanediamide
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C32H48N4O7S2Si
 1
1
IC50 = 560 nM
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CP0415303
N-hydroxy-6-[(3S,6R,9S,12R)-2,5,8,11-tetraoxo-6,9-dipentyl-1,4,7,10-tetrazabicyclo[10.3.0]pentadecan-3-yl]hexanamide
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C27H47N5O6
 1
1
IC50 = 570 nM
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CP0568562
4-[3-(4-benzhydrylpiperazin-1-yl)propyl]-N-hydroxybenzamide
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C27H31N3O2
 1
1
IC50 = 580 nM
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CP0387131
N-[4-[2-[(2S,3S,5S)-2-[[tert-butyl(dimethyl)silyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]-1,3-dithian-2-yl]phenyl]-N'-hydroxyhexanediamide
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C32H48N4O7S2Si
 1
1
IC50 = 590 nM
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CP0565040
(1S,7Z,10S,16E,21R)-7-ethylidene-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C21H30N4O6S2
 1
1
IC50 = 859 nM
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CP0451722
(1S,7R,10S,16E,21R)-7-methyl-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C20H30N4O6S2
 1
1
IC50 = 1008 nM
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CP0565042
(1S,7S,10S,16E,21R)-7-methyl-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C20H30N4O6S2
 1
1
IC50 = 1022 nM
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CP0554563
(1S,10S,16E,21R)-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C19H28N4O6S2
 1
1
IC50 = 1316 nM
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CP0565041
(1S,7S,10S,16E,21R)-7-(2-methylpropyl)-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C23H36N4O6S2
 1
1
IC50 = 2255 nM
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CP0568560
3-[(4-benzhydrylpiperazin-1-yl)methyl]-N-hydroxybenzamide
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C25H27N3O2
 1
1
IC50 = 6600 nM
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CP0558284
(1S,7R,10S,16E,21R)-7-(2-methylpropyl)-21-propan-2-yl-2-oxa-12,13-dithia-5,8,20,23-tetrazabicyclo[8.7.6]tricos-16-ene-3,6,9,19,22-pentone
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C23H36N4O6S2
 1
1
IC50 = 8452 nM
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CP0231885
1-[(2R,4S,5S)-5-[[tert-butyl(dimethyl)silyl]oxymethyl]-4-[2-(3,4-dimethoxyphenyl)-1,3-dithian-2-yl]oxolan-2-yl]-5-methylpyrimidine-2,4-dione
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C28H42N2O6S2Si
 1
1
IC50 > 10000 nM
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CP0575541
2-[(4-benzhydrylpiperazin-1-yl)methyl]-N-hydroxybenzamide
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C25H27N3O2
 1
1
IC50 > 100000 nM
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