General Information of the Protein
Protein ID
PT04559
Protein Name
Splicing factor 3B subunit 3
Secondarily
Protein Name
Pre-mRNA-splicing factor SF3b 130 kDa subunit
STAF130
Spliceosome-associated protein 130
Gene Name
SF3B3
Secondarily
Gene Name
KIAA0017
SAP130
Sequence
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF
    Show/Hide
Organism
Homo sapiens, Human
Protein Classification
Other nuclear protein
Function
Component of the 17S U2 SnRNP complex of the spliceosome, a large ribonucleoprotein complex that removes introns from transcribed pre-mRNAs (PubMed:10490618, PubMed:10882114, PubMed:27720643, PubMed:28781166, PubMed:12234937, PubMed:32494006, PubMed:34822310). The 17S U2 SnRNP complex (1) directly participates in early spliceosome assembly and (2) mediates recognition of the intron branch site during pre-mRNA splicing by promoting the selection of the pre-mRNA branch-site adenosine, the nucleophile for the first step of splicing (PubMed:12234937, PubMed:32494006, PubMed:34822310). Within the 17S U2 SnRNP complex, SF3B3 is part of the SF3B subcomplex, which is required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence in pre-mRNA (PubMed:12234937, PubMed:27720643). Sequence independent binding of SF3A and SF3B subcomplexes upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA (PubMed:12234937). May also be involved in the assembly of the 'E' complex (PubMed:10882114). Also acts as a component of the minor spliceosome, which is involved in the splicing of U12-type introns in pre-mRNAs (PubMed:15146077, PubMed:33509932).
    Show/Hide
Uniprot ID
Primary ID:
Q15393

Secondarily ID:
Q6NTI8
Q96GC0
Q9BPY2
Q9UFX7
Q9UJ29
    Show/Hide
Ensembl ID
ENSG00000189091
HGNC ID
HGNC:10770
Subcellular Location
Nucleus
Map of Molecular Bioactivity Related to the Protein
Map of Molecular Bioactivity Related to the Protein

Protein
Cell Line
Compound

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Protein
Cell Line ID: CL000118 , U-251MG
Compound ID Compound Name Compound Formula
CP0846153
pladienolide B
   Show/Hide
C30H50O8
 1
1
IC50 = 1.3 nM
   TI
   LI
   LO
   TS
CP0845437
pladienolides D
   Show/Hide
C30H50O9
 1
1
IC50 = 3.3 nM
   TI
   LI
   LO
   TS
CP0850965
(3R,6R,7S,8E,10S,11S,12E,14E,16R,18R,19R,20R,21S)-7-[(4-cycloheptylpiperazin-1-yl)carbonyl]oxy-3,6,16,21-tetrahydroxy-6,10,12,16,20-pentamethyl-18,19-epoyxtrichosa-8,12,14-trien-11-olide
   Show/Hide
C40H68N2O9
 1
1
IC50 = 3.6 nM
   TI
   LI
   LO
   TS
CP0852133
pladienolide C
   Show/Hide
C30H48O8
 1
1
IC50 = 5 nM
   TI
   LI
   LO
   TS
CP0852132
(3R,6R,7S,8E,10S,11S,12E,14E,16S,18R,19R,20R,21S)-7-(N-[G-3H]-ethylcarbamoyloxy)-3,6,21-trihydroxy-6,10,12,16,20-pentamethyl-18,19-epoxytricosa-8,12,14-triene-11-olide
   Show/Hide
C31H53NO8
 1
1
IC50 = 6.6 nM
   TI
   LI
   LO
   TS
CP0666814
FK-506
   Show/Hide
C44H69NO12
 1
1
IC50 = 13.8 nM
   TI
   LI
   LO
   TS
CP0849646
pladienolide E
   Show/Hide
C30H50O9
 1
1
IC50 = 58.9 nM
   TI
   LI
   LO
   TS
CP0863725
(3R,6R,7S,8E,10S,11S,12E,14E,16S,18R,19R,20R,21S)-7-(N-{2-[2-(2-{N-[5-(5,5-difluoro-7,9-dimethyl-5H-dipyrrolo[1,2-c:2',1'-f][1,3,2]diazaborinin-4-ium-5-uido-3-yl)pentanoyl]amino}ethoxy)ethoxy]ethyl}carbamoyloxy)-3,6,21-trihydroxy-6,10,12,16,20-pentamethyl-18,19-epoyxtrichosa-8,12,14-trien-11-olide
   Show/Hide
C51H79BF2N4O11
 1
1
IC50 = 78.4 nM
   TI
   LI
   LO
   TS
CP0849645
pladienolide A
   Show/Hide
C28H48O7
 1
1
IC50 = 307.7 nM
   TI
   LI
   LO
   TS
CP0005479
CHEBI:46024
   Show/Hide
C17H22N2O3
 1
1
IC50 = 611.2 nM
   TI
   LI
   LO
   TS
CP0849647
(3R,6R,7S,8E,10S,11S,12E,14E,16S,18R,19R,20R,21S)-3,6,21-trihydroxy-6,10,12,16,20-pentamethyl-7-{N-[(5S)-6-{N-methyl-N-[2-(N-methyl-N-{5-[(3aR,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]amino}-6-oxo-5-(N-{4-[3-(trifluoromethyl)-3H-diaziren-3-yl]benzoyl}amino)hexyl]carbamoyloxy}-18,19-epoxytricosa-8,12,14-triene-11-olide
   Show/Hide
C58H87F3N8O12S
 1
1
IC50 = 644.8 nM
   TI
   LI
   LO
   TS
CP0877427
pladienolide F
   Show/Hide
C28H48O8
 1
1
IC50 = 2153.9 nM
   TI
   LI
   LO
   TS
CP0009077
LACTACYSTIN
   Show/Hide
C15H24N2O7S
 1
1
IC50 = 3481 nM
   TI
   LI
   LO
   TS