General Information of the Compound
Compound ID
CP0380345
Compound Name
3-((1H-imidazol-4-yl)methyl)pyridine
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Synonyms
3-((1H-imidazol-4-yl)methyl)pyridine
BDBM50326297
CHEMBL78838
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Structure
Formula
C9H9N3
Molecular Weight
159.192
Canonical SMILES
C(c1cnc[nH]1)c1cccnc1
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InChI
InChI=1S/C9H9N3/c1-2-8(5-10-3-1)4-9-6-11-7-12-9/h1-3,5-7H,4H2,(H,11,12)
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InChIKey
IQMRECYOUIKYGG-UHFFFAOYSA-N
Physicochemical Property
logP
1.3955
Rotatable Bonds
2
Heavy Atom Count
12
Polar Areas
41.57
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
2
Complexity
12

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 9812843
SID: 16472133
ChEMBL ID
CHEMBL78838
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT01194, Histamine H3 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000074 SK-N-MC Homo sapiens (Human)  2
1
EC50 = 38.9 nM
   TI
   LI
   LO
   TS
2
Ki = 52.48 nM
   TI
   LI
   LO
   TS
CL000011 CHO Cricetulus griseus (Chinese hamster)  2
1
EC50 = 140 nM
   TI
   LI
   LO
   TS
2
Ki = 76 nM
   TI
   LI
   LO
   TS
Protein ID: PT01711, Histamine H4 receptor
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000074 SK-N-MC Homo sapiens (Human)  2
1
EC50 = 15135.61 nM
   TI
   LI
   LO
   TS
2
Ki = 691.83 nM
   TI
   LI
   LO
   TS
CL000006 HEK293 Homo sapiens (Human)  1
1
Ki = 100 nM
   TI
   LI
   LO
   TS
Clinical Information about the Compound
Drug 1 ( 3-((1H-imidazol-4-yl)methyl)pyridine )
Drug Name 3-((1H-imidazol-4-yl)methyl)pyridine
Target(s)
Histamine H3 receptor (H3R)
Inhibitor