General Information of the Protein
Protein ID
PT02120
Protein Name
Retinoic acid receptor beta
Secondarily
Protein Name
Nuclear receptor subfamily 1 group B member 2
Gene Name
RARB
Secondarily
Gene Name
Nr1b2
Sequence
MSTSSHACPVPAVRGHMTHYPAAPYPLLFPPVIRGLSLPPLHGLHGHPPPSGCSTPSPASVGQACQRTTGGSQFAASTKWTPSLNAAIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNIAEHSPSVSPSSVENSGVSQSPLLQ
    Show/Hide
Organism
Mus musculus, Mouse
Protein Classification
Transcription factor
>
Nuclear receptor
>
Nuclear hormone receptor subfamily 1
>
Nuclear hormone receptor subfamily 1 group B
>
Nuclear hormone receptor subfamily 1 group B member 2
Function
Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5. In the absence of ligand, acts mainly as an activator of gene expression due to weak binding to corepressors (By similarity). The RXRA/RARB heterodimer can act as a repressor on the DR1 element and as an activator on the DR5 element (By similarity). In concert with RARG, required for skeletal growth, matrix homeostasis and growth plate function (PubMed:19389355).
    Show/Hide
Uniprot ID
Primary ID:
P22605

Secondarily ID:
P11417
P22604
    Show/Hide
Ensembl ID
ENSG00000077092
Subcellular Location
Nucleus
Cytoplasm
Map of Molecular Bioactivity Related to the Protein
Map of Molecular Bioactivity Related to the Protein

Protein
Cell Line
Compound

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Protein
Cell Line ID: CL000044 , CV-1
Compound ID Compound Name Compound Formula
CP0040160
9-cis-retinoic acid (9cRA)
   Show/Hide
C20H28O2
 1
1
EC50 = 2 nM
   TI
   LI
   LO
   TS
CP0101102
(2E,4E,6E)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1
EC50 = 20 nM
   TI
   LI
   LO
   TS
CP0126004
(2E,4E,6E,8Z)-3,7-Dimethyl-9-(2,6,6-trimethyl-cyclohex-1-enyl)-nona-2,4,6,8-tetraenoic acid
   Show/Hide
C20H28O2
 1
1
EC50 = 27 nM
   TI
   LI
   LO
   TS
CP0098128
(2E,4E,6E)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1
EC50 = 110 nM
   TI
   LI
   LO
   TS
CP0216905
(2Z,4E,6E)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1
EC50 = 150 nM
   TI
   LI
   LO
   TS
CP0043939
(2E,4Z,6Z)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1
EC50 > 2000 nM
   TI
   LI
   LO
   TS
CP0082294
(2E,4Z,6Z)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1
EC50 > 2000 nM
   TI
   LI
   LO
   TS
CP0162300
(2Z,4E,6E)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1
EC50 > 2000 nM
   TI
   LI
   LO
   TS
Biochemical Assays
Compound ID Compound Name Compound Formula
CP0040160
9-cis-retinoic acid (9cRA)
   Show/Hide
C20H28O2
 2
1 IC50 = 5 nM
2 Kd = 13 nM
CP0101102
(2E,4E,6E)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1 IC50 = 6 nM
CP0126004
(2E,4E,6E,8Z)-3,7-Dimethyl-9-(2,6,6-trimethyl-cyclohex-1-enyl)-nona-2,4,6,8-tetraenoic acid
   Show/Hide
C20H28O2
 1
1 IC50 = 8 nM
CP0098128
(2E,4E,6E)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1 IC50 = 49 nM
CP0216905
(2Z,4E,6E)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1 IC50 = 371 nM
CP0082294
(2E,4Z,6Z)-8-[3-Ethyl-2-isopropyl-cyclohex-2-en-(E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C21H30O2
 1
1 IC50 > 1000 nM
CP0162300
(2Z,4E,6E)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1 IC50 > 1000 nM
CP0043939
(2E,4Z,6Z)-8-[3,4-Dihydro-2H-naphthalen-(1E)-ylidene]-3,7-dimethyl-octa-2,4,6-trienoic acid
   Show/Hide
C20H22O2
 1
1 IC50 > 2000 nM
Similar Protein(s) and Bioactivity Statistics
50% Identity
Protein ID Protein Name Protein Organism
PT02121 Retinoic acid receptor gamma Mus musculus, Mouse