General Information of the Compound
Compound ID
CP0457329
Compound Name
4-[[3-[(dimethylamino)methyl]-2-methylindol-1-yl]methyl]-N-hydroxybenzamide
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Structure
Formula
C20H23N3O2
Molecular Weight
337.423
Canonical SMILES
CN(C)Cc1c(C)n(Cc2ccc(cc2)C(=O)NO)c2ccccc12
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InChI
InChI=1S/C20H23N3O2/c1-14-18(13-22(2)3)17-6-4-5-7-19(17)23(14)12-15-8-10-16(11-9-15)20(24)21-25/h4-11,25H,12-13H2,1-3H3,(H,21,24)
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InChIKey
AWFYSKUENHXUOS-UHFFFAOYSA-N
Physicochemical Property
logP
3.17862
Rotatable Bonds
5
Heavy Atom Count
25
Polar Areas
57.5
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Complexity
25

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 88920533
ChEMBL ID
CHEMBL4100664
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000012 Sf21 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 9730 nM
   TI
   LI
   LO
   TS
Protein ID: PT01213, Histone deacetylase 6
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 6.17 nM
   TI
   LI
   LO
   TS
Cell Viability or Cytotoxicity Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000067 HCT 116 Homo sapiens (Human)  1
1
GI50 > 5000 nM
   TI
   LI
   LO
   TS
CL000068 A-549 Homo sapiens (Human)  1
1
GI50 > 5000 nM
   TI
   LI
   LO
   TS