General Information of the Compound
Compound ID
CP0294381
Compound Name
CHEBI:31550
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Synonyms
(-)-Epothilone B
(1S,3S,7S,10R,11S,12S,16R)-7,11-dihydroxy-8,8,10,12,16-pentamethyl-3-((E)-1-(2-methylthiazol-4-yl)prop-1-en-2-yl)-4,17-dioxabicyclo[14.1.0]heptadecane-5,9-dione
152044-54-7
7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE
AK163080
CHEBI:31550
EPO 906
EPO 906A
EPO906
Epo B
EpoB
Epothilon B
Epothilone B
Epothilone B (EPO906, Patupilone)
GNF-PF-193
Patupilone
Patupilone [INN]
UEC0H0URSE
UNII-UEC0H0URSE
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Structure
Formula
C27H41NO6S
Molecular Weight
507.693
Canonical SMILES
C[C@H]1CCC[C@@]2(C)O[C@H]2C[C@H](OC(=O)C[C@H](O)C(C)(C)C(=O)[C@H](C)[C@H]1O)C(\C)=C\c1csc(C)n1
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InChI
InChI=1S/C27H41NO6S/c1-15-9-8-10-27(7)22(34-27)12-20(16(2)11-19-14-35-18(4)28-19)33-23(30)13-21(29)26(5,6)25(32)17(3)24(15)31/h11,14-15,17,20-22,24,29,31H,8-10,12-13H2,1-7H3/b16-11+/t15-,17+,20-,21-,22-,24-,27+/m0/s1
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InChIKey
QXRSDHAAWVKZLJ-PVYNADRNSA-N
CAS
152044-54-7
Physicochemical Property
logP
4.47752
Rotatable Bonds
2
Heavy Atom Count
35
Polar Areas
109.25
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
8
Complexity
35

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 448013
SID: 12014962
ChEMBL ID
CHEMBL94657
DrugBank ID
DB03010
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT06109, Geminin
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000015 SW480 Homo sapiens (Human)  1
1
Potency ~ 3349.8 nM
   TI
   LI
   LO
   TS
Protein ID: PT04880, Nuclear receptor subfamily 1 group I member 2
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000063 Hep-G2 Homo sapiens (Human)  1
1
EC50 = 10 nM
   TI
   LI
   LO
   TS
Protein ID: PT01552, Nuclear receptor subfamily 1 group I member 2
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000514 DPX2 Homo sapiens (Human)  1
1
EC50 = 12600 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 31600 nM
Clinical Information about the Compound
Drug 1 ( Epothilone B )
Drug Name Epothilone B
Indication
Solid tumour/cancer
Discontinued in Phase 3