General Information of the Compound
Compound ID
CP0845216
Compound Name
N-(1-(2-(2-(3-(6-((2-(1H-indol-3-yl)ethyl)(4-(3-(hydroxyamino)-3-oxoprop-1-enyl)benzyl)amino)hexylamino)-3-oxopropyl)disulfanyl)ethylamino)-1-oxo-6-(5-(2-oxo-hexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamido)hexan-2-yl)-4-azidobenzamide
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Structure
Formula
C54H72N12O7S3
Molecular Weight
1097.448
Canonical SMILES
[N-]=[N+]=Nc1ccc(C(=O)NC(CCCCNC(=O)CCCCC2SCC3NC(=O)NC32)C(=O)NCCSSCCC(=O)NCCCCCCN(CCc2c[nH]c3ccccc23)Cc2ccc(/C=C/C(=O)NO)cc2)cc1
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InChI
InChI=1S/C54H72N12O7S3/c55-65-63-42-23-21-40(22-24-42)52(70)60-45(13-7-9-29-56-48(67)15-6-5-14-47-51-46(37-74-47)61-54(72)62-51)53(71)58-30-34-76-75-33-27-49(68)57-28-8-1-2-10-31-66(32-26-41-35-59-44-12-4-3-11-43(41)44)36-39-18-16-38(17-19-39)20-25-50(69)64-73/h3-4,11-12,16-25,35,45-47,51,59,73H,1-2,5-10,13-15,26-34,36-37H2,(H,56,67)(H,57,68)(H,58,71)(H,60,70)(H,64,69)(H2,61,62,72)/b25-20+
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InChIKey
LFBXOZCBTKPDGX-LKUDQCMESA-N
Physicochemical Property
logP
8.0482
Rotatable Bonds
35
Heavy Atom Count
76
Polar Areas
274.65
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
12
Complexity
76

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 44453790
ChEMBL ID
CHEMBL270224
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 73 nM
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Protein ID: PT00995, Histone deacetylase 3
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 42 nM
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Protein ID: PT00994, Histone deacetylase 4
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 4 nM
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Protein ID: PT01213, Histone deacetylase 6
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 98 nM
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