General Information of the Compound
Compound ID
CP0383886
Compound Name
CHEBI:71223
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Synonyms
Folotyn (TN)
Pralatrexate
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Structure
Formula
C23H23N7O5
Molecular Weight
477.481
Canonical SMILES
Nc1nc(N)c2nc(CC(CC#C)c3ccc(cc3)C(=O)N[C@@H](CCC(O)=O)C(O)=O)cnc2n1
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InChI
InChI=1S/C23H23N7O5/c1-2-3-14(10-15-11-26-20-18(27-15)19(24)29-23(25)30-20)12-4-6-13(7-5-12)21(33)28-16(22(34)35)8-9-17(31)32/h1,4-7,11,14,16H,3,8-10H2,(H,28,33)(H,31,32)(H,34,35)(H4,24,25,26,29,30)/t14?,16-/m0/s1
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InChIKey
OGSBUKJUDHAQEA-WMCAAGNKSA-N
CAS
146464-95-1
Physicochemical Property
logP
0.9816
Rotatable Bonds
10
Heavy Atom Count
35
Polar Areas
207.3
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
9
Complexity
35

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 148121
SID: 14907808
ChEMBL ID
CHEMBL1201746
DrugBank ID
DB06813
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT04881, Folate receptor alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000938 Chinese hamster RT16 Cricetulus griseus (Chinese hamster)  2
1
IC50 = 168 nM
   TI
   LI
   LO
   TS
2
IC50 > 1000 nM
   TI
   LI
   LO
   TS
Protein ID: PT05580, Proton-coupled folate transporter
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000937 R2/PCFT4 Cricetulus griseus (Chinese hamster)  1
1
IC50 = 57 nM
   TI
   LI
   LO
   TS
Clinical Information about the Compound
Drug 1 ( Pralatrexate )
Drug Name Pralatrexate
Company Allos Therapeutics
Indication
Breast cancer
Approved
Peripheral T-cell lymphoma
Approved
Target(s)
Polypeptide deformylase (PDF)
Inhibitor