General Information of the Compound
Compound ID
CP0224328
Compound Name
13-(1,3-dihydroxypropan-2-ylamino)-6,20-dihydroxy-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-3,13,23-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1,4(9),5,7,10,15,17(22),18,20-nonaene-12,14-dione
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Synonyms
12-(beta-D-Glucopyranosyl)-2,10-dihydroxy-6-[2-hydroxy-1-(hydroxymethyl)ethylamino]-6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazole-5,7-dione
ED-749
Edotecarin
Edotecarin < Prop INN
J-107088
PF-804950
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Structure
Formula
C29H28N4O11
Molecular Weight
608.56
Canonical SMILES
OCC(CO)NN1C(=O)c2c(C1=O)c1c3ccc(O)cc3n([C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)c1c1[nH]c3cc(O)ccc3c21
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InChI
InChI=1S/C29H28N4O11/c34-7-10(8-35)31-33-27(42)20-18-13-3-1-11(37)5-15(13)30-22(18)23-19(21(20)28(33)43)14-4-2-12(38)6-16(14)32(23)29-26(41)25(40)24(39)17(9-36)44-29/h1-6,10,17,24-26,29-31,34-41H,7-9H2/t17-,24-,25+,26-,29-/m1/s1
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InChIKey
QMVPQBFHUJZJCS-NTKFZFFISA-N
CAS
174402-32-5
Physicochemical Property
logP
-0.7336
Rotatable Bonds
6
Heavy Atom Count
44
Polar Areas
241.2
Hydrogen Bond Donor Count
10
Hydrogen Bond Acceptor Count
13
Complexity
44

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 9808998
SID: 14765091
ChEMBL ID
CHEMBL435191
DrugBank ID
DB04882
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT03467, DNA topoisomerase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000369 P388/S Mus musculus (Mouse)  1
1
EC50 = 1.5 nM
   TI
   LI
   LO
   TS
Cell Viability or Cytotoxicity Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000134 DLD-1 Homo sapiens (Human)  1
1
IC50 = 840 nM
   TI
   LI
   LO
   TS
Clinical Information about the Compound
Drug 1 ( Edotecarin )
Drug Name Edotecarin
Company Pfizer
Indication
Gastric adenocarcinoma
Phase 3
Target(s)
DNA topoisomerase I (TOP1)
Inhibitor