General Information of the Compound
Compound ID
CP0063946
Compound Name
CHEBI:4778
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Synonyms
2,5-Dihydroxy-3-undecyl-1,4-benzoquinone
2,5-Dihydroxy-3-undecyl-2,5-cyclohexadiene-1,4-dione
2,5-Dihydroxy-3-undecyl-p-benzoquinone
2,5-dihydroxy-3-undecylcyclohexa-2,5-diene-1,4-dione
550-24-3
AK115155
Apoptosis Activator III, Embelin
BRN 1885786
C17H26O4
CHEBI:4778
EINECS 208-979-8
EMBELIN
Embelic acid
Embelin, Embelia ribes
Emberine
NSC 91874
NSC91874
SHC6U8F5ER
SR-01000597536
SpecPlus_000501
Spectrum_001513
Tocris-2156
UNII-SHC6U8F5ER
XIAP inhibitor, Embelin
p-Benzoquinone, 2,5-dihydroxy-3-undecyl-
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Structure
Formula
C17H26O4
Molecular Weight
294.391
Canonical SMILES
CCCCCCCCCCCC1=C(O)C(=O)C=C(O)C1=O
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InChI
InChI=1S/C17H26O4/c1-2-3-4-5-6-7-8-9-10-11-13-16(20)14(18)12-15(19)17(13)21/h12,18,21H,2-11H2,1H3
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InChIKey
IRSFLDGTOHBADP-UHFFFAOYSA-N
CAS
550-24-3
Physicochemical Property
logP
4.3131
Rotatable Bonds
10
Heavy Atom Count
21
Polar Areas
74.6
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Complexity
21

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 3218
SID: 85197623
ChEMBL ID
CHEMBL221137
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT04383, G-protein coupled receptor 84
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  2
1
EC50 = 89 nM
   TI
   LI
   LO
   TS
2
EC50 = 630 nM
   TI
   LI
   LO
   TS
CL000460 Flp-In-T-REx-293 Homo sapiens (Human)  2
1
EC50 = 200 nM
   TI
   LI
   LO
   TS
2
EC50 = 630 nM
   TI
   LI
   LO
   TS
CL000011 CHO Cricetulus griseus (Chinese hamster)  5
1
EC50 = 400 nM
   TI
   LI
   LO
   TS
2
EC50 = 421 nM
   TI
   LI
   LO
   TS
3
EC50 = 795 nM
   TI
   LI
   LO
   TS
4
EC50 = 5000 nM
   TI
   LI
   LO
   TS
5
Ki = 23.6 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 EC50 = 12300 nM
Protein ID: PT06109, Geminin
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000015 SW480 Homo sapiens (Human)  1
1
Potency ~ 103.2 nM
   TI
   LI
   LO
   TS
Protein ID: PT05648, Macrophage-expressed gene 1 protein
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000068 A-549 Homo sapiens (Human)  1
1
IC50 = 210 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 210 nM
Protein ID: PT01242, Polyunsaturated fatty acid 5-lipoxygenase
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000831 PMNL Homo sapiens (Human)  1
1
IC50 = 3500 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 60 nM
Clinical Information about the Compound
Drug 1 ( EMBELIN )
Drug Name EMBELIN
Target(s)
XIAP messenger RNA (XIAP mRNA)
Inhibitor