General Information of the Compound
Compound ID
CP0037062
Compound Name
6-amino-2-[(4-tert-butylphenyl)methylsulfanyl]-3-methylpyrimidin-4-one
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Synonyms
1356834-62-2
6-amino-2-[(4-tert-butylphenyl)methylsulfanyl]-3-methylpyrimidin-4-oneBC600825
BDBM50362580
CHEMBL1938867
GTPL5733
N-Me-aminopyrimidinone 9
ZINC73167698
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Structure
Formula
C16H21N3OS
Molecular Weight
303.431
Canonical SMILES
Cn1c(SCc2ccc(cc2)C(C)(C)C)nc(N)cc1=O
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InChI
InChI=1S/C16H21N3OS/c1-16(2,3)12-7-5-11(6-8-12)10-21-15-18-13(17)9-14(20)19(15)4/h5-9H,10,17H2,1-4H3
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InChIKey
AJMIFZLEDTUBTN-UHFFFAOYSA-N
Physicochemical Property
logP
2.9523
Rotatable Bonds
3
Heavy Atom Count
21
Polar Areas
60.91
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Complexity
21

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 56951318
SID: 135658179
ChEMBL ID
CHEMBL1938867
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT01105, Sodium channel protein type 5 subunit alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 200 nM
   TI
   LI
   LO
   TS
Protein ID: PT01000, Sodium channel protein type 9 subunit alpha
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  3
1
IC50 = 80 nM
   TI
   LI
   LO
   TS
2
IC50 = 420 nM
   TI
   LI
   LO
   TS
3
IC50 = 500 nM
   TI
   LI
   LO
   TS
Clinical Information about the Compound
Drug 1 ( N-Me-aminopyrimidinone 9 )
Drug Name N-Me-aminopyrimidinone 9
Target(s)
Voltage-gated sodium channel alpha Nav1.7 (SCN9A)
Inhibitor (gating inhibitor)