General Information of the Protein
Protein ID
PT06775
Protein Name
DNA-directed RNA polymerase I subunit RPA1
Secondarily
Protein Name
A190
DNA-directed RNA polymerase I largest subunit
DNA-directed RNA polymerase I subunit A
RNA polymerase I 194 kDa subunit
Gene Name
POLR1A
Sequence
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLLLCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKETPRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
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Organism
Homo sapiens, Human
Protein Classification
Enzyme
>
Transferase
Function
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Forms the polymerase active center together with the second largest subunit. A single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol I. A bridging helix emanates from RPA1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol I by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition (By similarity).
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Uniprot ID
Primary ID:
O95602

Secondarily ID:
B7Z7T0
D6W5M0
Q0VG05
Q9UEH0
Q9UFT9
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Ensembl ID
ENSG00000068654
HGNC ID
HGNC:17264
Subcellular Location
Nucleus
Nucleolus
Chromosome
Map of Molecular Bioactivity Related to the Protein
Map of Molecular Bioactivity Related to the Protein

Protein
Cell Line
Compound

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Protein
Cell Line ID: CL000043 , U2OS
Compound ID Compound Name Compound Formula
CP0447227
N-[2-(dimethylamino)propyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H22N4O2
 1
1
IC50 = 40 nM
   TI
   LI
   LO
   TS
CP0447230
N-[2-(dimethylamino)ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C21H20N4O2
 1
1
IC50 = 50 nM
   TI
   LI
   LO
   TS
CP0510376
12-oxo-N-(2-pyrrolidin-1-ylethyl)-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H22N4O2
 1
1
IC50 = 90 nM
   TI
   LI
   LO
   TS
CP0497368
N-[1-(dimethylamino)propan-2-yl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H22N4O2
 1
1
IC50 = 110 nM
   TI
   LI
   LO
   TS
CP0489957
N-[2-(diethylamino)ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H24N4O2
 1
1
IC50 = 140 nM
   TI
   LI
   LO
   TS
CP0418162
12-oxo-N-(2-piperidin-1-ylethyl)-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C24H24N4O2
 1
1
IC50 = 180 nM
   TI
   LI
   LO
   TS
CP0447226
N-(1-methylpiperidin-4-yl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H22N4O2
 1
1
IC50 = 180 nM
   TI
   LI
   LO
   TS
CP0468554
N-(azetidin-3-yl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C20H16N4O2
 1
1
IC50 = 210 nM
   TI
   LI
   LO
   TS
CP0556205
N-[3-(dimethylamino)propyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H22N4O2
 1
1
IC50 = 430 nM
   TI
   LI
   LO
   TS
CP0458495
N-[4-(dimethylamino)butyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H24N4O2
 1
1
IC50 = 660 nM
   TI
   LI
   LO
   TS
CP0499248
N-[2-[2-methoxyethyl(methyl)amino]ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H24N4O3
 1
1
IC50 = 730 nM
   TI
   LI
   LO
   TS
CP0506664
N-(2-imidazol-1-ylethyl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H17N5O2
 1
1
IC50 = 980 nM
   TI
   LI
   LO
   TS
CP0471118
N-[2-(4-methylpiperazin-1-yl)ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C24H25N5O2
 1
1
IC50 = 1090 nM
   TI
   LI
   LO
   TS
CP0447228
N-(2-morpholin-4-ylethyl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H22N4O3
 1
1
IC50 = 1250 nM
   TI
   LI
   LO
   TS
CP0506663
N-[2-(diethylamino)ethyl]-11-oxopyrido[2,1-b]quinazoline-6-carboxamide
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C19H22N4O2
 1
1
IC50 = 1350 nM
   TI
   LI
   LO
   TS
CP0468553
N-[2-(1-methylpyrrolidin-2-yl)ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C24H24N4O2
 1
1
IC50 = 2010 nM
   TI
   LI
   LO
   TS
CP0418160
N-[2-(dimethylamino)ethyl]-11-oxopyrido[2,1-b]quinazoline-6-carboxamide
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C17H18N4O2
 1
1
IC50 = 2170 nM
   TI
   LI
   LO
   TS
CP0468555
N-[2-[di(propan-2-yl)amino]ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C25H28N4O2
 1
1
IC50 = 3040 nM
   TI
   LI
   LO
   TS
CP0418161
N-(2-methylsulfonylethyl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C20H17N3O4S
 1
1
IC50 = 5210 nM
   TI
   LI
   LO
   TS
CP0417968
12-oxo-N-(2-pyridin-3-ylethyl)-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C24H18N4O2
 1
1
IC50 = 11800 nM
   TI
   LI
   LO
   TS
CP0568979
12-oxo-N-[2-(2-oxoimidazolidin-1-yl)ethyl]-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H19N5O3
 1
1
IC50 = 13100 nM
   TI
   LI
   LO
   TS
CP0499245
12-oxo-N-(2-pyridin-2-ylethyl)-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C24H18N4O2
 1
1
IC50 = 15840 nM
   TI
   LI
   LO
   TS
CP0558900
N-[2-(dimethylamino)ethyl]-N-methyl-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C22H22N4O2
 1
1
IC50 = 22100 nM
   TI
   LI
   LO
   TS
CP0417969
N-[2-(1H-indol-3-yl)ethyl]-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C27H20N4O2
 1
1
IC50 = 31700 nM
   TI
   LI
   LO
   TS
CP0506665
4-[3-(diethylamino)pyrrolidine-1-carbonyl]-12H-benzo[g]pyrido[2,1-b]quinazolin-12-one
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C25H26N4O2
 1
1
IC50 = 31800 nM
   TI
   LI
   LO
   TS
CP0499246
N-[3-(dimethylamino)propyl]-N-methyl-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H24N4O2
 1
1
IC50 = 33850 nM
   TI
   LI
   LO
   TS
CP0571957
tert-butyl 3-[(12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carbonyl)amino]azetidine-1-carboxylate
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C25H24N4O4
 1
1
IC50 = 35400 nM
   TI
   LI
   LO
   TS
CP0571959
N-methyl-N-(1-methylpyrrolidin-3-yl)-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H22N4O2
 1
1
IC50 = 41990 nM
   TI
   LI
   LO
   TS
CP0499243
2-(dimethylamino)ethyl 12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxylate
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C21H19N3O3
 1
1
IC50 = 50900 nM
   TI
   LI
   LO
   TS
CP0461309
4-(4-propan-2-ylpiperazine-1-carbonyl)-12H-benzo[g]pyrido[2,1-b]quinazolin-12-one
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C24H24N4O2
 1
1
IC50 > 100000 nM
   TI
   LI
   LO
   TS
CP0499244
N-[2-(dimethylamino)ethyl]-N-ethyl-12-oxo-12H-benzo[g]pyrido[2,1-b]quinazoline-4-carboxamide
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C23H24N4O2
 1
1
IC50 > 100000 nM
   TI
   LI
   LO
   TS
CP0499247
4-[(3S)-3-(dimethylamino)pyrrolidine-1-carbonyl]-12H-benzo[g]pyrido[2,1-b]quinazolin-12-one
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C23H22N4O2
 1
1
IC50 > 100000 nM
   TI
   LI
   LO
   TS