General Information of the Compound
Compound ID
CP0496481
Compound Name
2-[(1E,3E,5E)-5-(3-ethyl-1,1-dimethyl-6,8-disulfobenzo[e]indol-2-ylidene)penta-1,3-dienyl]-3-[6-[4-[(4Z,7S,10S)-4-ethylidene-10-[(E)-4-(heptyldisulfanyl)but-1-enyl]-2,5,8,12-tetraoxo-9-oxa-16-thia-3,6,13,18-tetrazabicyclo[13.2.1]octadeca-1(17),15(18)-dien-7-yl]butylamino]-6-oxohexyl]-1,1-dimethyl-8-sulfobenzo[e]indol-3-ium-6-sulfonate
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Structure
Formula
C70H87N7O18S7
Molecular Weight
1538.966
Canonical SMILES
CCCCCCCSSCC\C=C\[C@@H]1CC(=O)NCc2nc(cs2)C(=O)N\C(=C/C)C(=O)N[C@@H](CCCCNC(=O)CCCCC[N+]2=C(\C=C\C=C\C=C3\N(CC)c4ccc5c(cc(cc5c4C3(C)C)S(O)(=O)=O)S(O)(=O)=O)C(C)(C)c3c2ccc2c(cc(cc32)S(O)(=O)=O)S([O-])(=O)=O)C(=O)O1
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InChI
InChI=1S/C70H87N7O18S7/c1-8-11-12-13-23-36-97-98-37-24-20-25-45-38-62(79)72-43-63-73-54(44-96-63)67(81)74-52(9-2)66(80)75-53(68(82)95-45)26-19-21-34-71-61(78)29-18-15-22-35-77-56-33-31-49-51(40-47(100(86,87)88)42-58(49)102(92,93)94)65(56)70(6,7)60(77)28-17-14-16-27-59-69(4,5)64-50-39-46(99(83,84)85)41-57(101(89,90)91)48(50)30-32-55(64)76(59)10-3/h9,14,16-17,20,25,27-28,30-33,39-42,44-45,53H,8,10-13,15,18-19,21-24,26,29,34-38,43H2,1-7H3,(H7-,71,72,74,75,78,79,80,81,83,84,85,86,87,88,89,90,91,92,93,94)/b25-20+,52-9-/t45-,53+/m1/s1
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InChIKey
FICXIENSVIWZLA-BHZGEQHOSA-N
Physicochemical Property
logP
11.1792
Rotatable Bonds
30
Heavy Atom Count
102
Polar Areas
382.15
Hydrogen Bond Donor Count
7
Hydrogen Bond Acceptor Count
20
Complexity
102

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 166626243
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 8 nM
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Protein ID: PT01213, Histone deacetylase 6
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000013 Sf9 Spodoptera frugiperda (Fall armyworm)  1
1
IC50 = 70 nM
   TI
   LI
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   TS