General Information of the Compound
Compound ID
CP0336829
Compound Name
4-((1H-benzo[d]imidazol-2-ylamino)methyl)-N-(2-aminophenyl)benzamide
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Structure
Formula
C21H19N5O
Molecular Weight
357.417
Canonical SMILES
Nc1ccccc1NC(=O)c1ccc(CNc2nc3ccccc3[nH]2)cc1
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InChI
InChI=1S/C21H19N5O/c22-16-5-1-2-6-17(16)24-20(27)15-11-9-14(10-12-15)13-23-21-25-18-7-3-4-8-19(18)26-21/h1-12H,13,22H2,(H,24,27)(H2,23,25,26)
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InChIKey
XDBOAFOJZRJJBV-UHFFFAOYSA-N
Physicochemical Property
logP
4.0095
Rotatable Bonds
5
Heavy Atom Count
27
Polar Areas
95.83
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
4
Complexity
27

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 22478903
ChEMBL ID
CHEMBL403466
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000203 T24 Homo sapiens (Human)  1
1
EC50 = 1000 nM
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Biochemical Assays
1 IC50 = 100 nM
Cell Viability or Cytotoxicity Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000767 HMEC-1 Homo sapiens (Human)  1
1
IC50 = 27000 nM
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