General Information of the Compound
Compound ID
CP0089788
Compound Name
(1S,2R,5R)-5-(6-Amino-purin-9-yl)-3-hydroxymethyl-cyclopent-3-ene-1,2-diol
    Show/Hide
Synonyms
(-)-9-(trans-2,trans-3-Dihydroxy-4-(hydroxymethyl)-cyclopent-4-enyl)-adenine
(1S,2R,5R)-5-(6-aminopurin-9-yl)-3-(hydroxymethyl)cyclopent-3-ene-1,2-diol
(1s,2r,5r)-5-(6-amino-9h-purin-9-yl)-3-(hydroxymethyl)cyclopent-3-ene-1,2-diol
4-Cyclopentene-1,2-diol, 3-(6-amino-9H-purin-9-yl)-5-(hydroxymethyl)-, (1S,2R,3R)-
72877-50-0
A-11079-B1B
AC1L2J1E
AC1Q4VG9
BDBM50006222
CCG-208688
CHEMBL8771
CTK5D6979
DIBRT
MolPort-044-561-069
NEOPLANOCIN A
NPC-A
NSC 316458
Nephanocin A
Neplanocin A
SCHEMBL10469277
ZINC3832328
    Show/Hide
Structure
Formula
C11H13N5O3
Molecular Weight
263.257
Canonical SMILES
Nc1ncnc2n(cnc12)[C@@H]1C=C(CO)[C@@H](O)[C@H]1O
    Show/Hide
InChI
InChI=1S/C11H13N5O3/c12-10-7-11(14-3-13-10)16(4-15-7)6-1-5(2-17)8(18)9(6)19/h1,3-4,6,8-9,17-19H,2H2,(H2,12,13,14)/t6-,8-,9+/m1/s1
    Show/Hide
InChIKey
XUGWUUDOWNZAGW-VDAHYXPESA-N
CAS
72877-50-0
Physicochemical Property
logP
-1.3963
Rotatable Bonds
2
Heavy Atom Count
19
Polar Areas
130.31
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
8
Complexity
19

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

    Show/Hide
Click to Show/Hide the External Link(s) of This Compound
PubChem ID
CID: 72968
SID: 14799029
ChEMBL ID
CHEMBL8771
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT01324, Adenosylhomocysteinase
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000004 SH-SY5Y Homo sapiens (Human)  1
1
IC50 = 10 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 1.5 nM
2 IC50 = 7.2 nM
3 IC50 = 15.194105 nM
4 IC50 = 900 nM
Clinical Information about the Compound
Drug 1 ( Neplanocin A )
Drug Name Neplanocin A
Target(s)
Adenosylhomocysteinase (AHCY)
Inhibitor