General Information of the Compound
Compound ID
CP0077916
Compound Name
5-Chloro-2-methyl-3-(1,2,3,6-tetrahydro-pyridin-4-yl)-1H-indole
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Synonyms
EMD 386088
EMD-386088
EMD386088
compound 18 [PMID 16055331]
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Structure
Formula
C14H15ClN2
Molecular Weight
246.741
Canonical SMILES
Cc1[nH]c2ccc(Cl)cc2c1C1=CCNCC1
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InChI
InChI=1S/C14H15ClN2/c1-9-14(10-4-6-16-7-5-10)12-8-11(15)2-3-13(12)17-9/h2-4,8,16-17H,5-7H2,1H3
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InChIKey
BPPGPYJBCVXILI-UHFFFAOYSA-N
Physicochemical Property
logP
3.50642
Rotatable Bonds
1
Heavy Atom Count
17
Polar Areas
27.82
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
1
Complexity
17

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 10131112
SID: 15122103
ChEMBL ID
CHEMBL364005
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT01354, 5-hydroxytryptamine receptor 6
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000006 HEK293 Homo sapiens (Human)  1
1
IC50 = 7.4 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 7.4 nM
Clinical Information about the Compound
Drug 1 ( EMD-386088 )
Drug Name EMD-386088
Target(s)
5-HT 6 receptor (HTR6)
Agonist