General Information of the Compound
Compound ID
CP0038702
Compound Name
6-{3-[1-(2-Diethylamino-ethyl)-1H-benzimidazole-5-carbonyl]-ureido}-hexanoic acid hydroxyamide
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Structure
Formula
C21H32N6O4
Molecular Weight
432.525
Canonical SMILES
CCN(CC)CCn1cnc2cc(ccc12)C(=O)NC(=O)NCCCCCC(=O)NO
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InChI
InChI=1S/C21H32N6O4/c1-3-26(4-2)12-13-27-15-23-17-14-16(9-10-18(17)27)20(29)24-21(30)22-11-7-5-6-8-19(28)25-31/h9-10,14-15,31H,3-8,11-13H2,1-2H3,(H,25,28)(H2,22,24,29,30)
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InChIKey
MZMRHGDCPYWCCN-UHFFFAOYSA-N
Physicochemical Property
logP
1.8833
Rotatable Bonds
12
Heavy Atom Count
31
Polar Areas
128.59
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
7
Complexity
31

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 46890067
ChEMBL ID
CHEMBL1085117
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT00991, Histone deacetylase 1
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000163 COLO 205 Homo sapiens (Human)  1
1
IC50 = 5100 nM
   TI
   LI
   LO
   TS
Biochemical Assays
1 IC50 = 21 nM