General Information of the Protein
Protein ID
PT02063
Protein Name
Tyrosyl-DNA phosphodiesterase 2
Secondarily
Protein Name
5'-tyrosyl-DNA phosphodiesterase
ETS1-associated protein 2
ETS1-associated protein II
TRAF and TNF receptor-associated protein
Tyrosyl-RNA phosphodiesterase
VPg unlinkase
Gene Name
TDP2
Secondarily
Gene Name
EAP2
TTRAP
AD-022
Sequence
MELGSCLEGGREAAEEEGEPEVKKRRLLCVEFASVASCDAAVAQCFLAENDWEMERALNSYFEPPVEESALERRPETISEPKTYVDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDIIL
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Organism
Homo sapiens, Human
Protein Classification
Enzyme
>
Phosphodiesterase
Function
DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 5'-phosphodiester bond, giving rise to DNA with a free 5' phosphate. Catalyzes the hydrolysis of dead-end complexes between DNA and the topoisomerase 2 (TOP2) active site tyrosine residue. The 5'-tyrosyl DNA phosphodiesterase activity can enable the repair of TOP2-induced DNA double-strand breaks/DSBs without the need for nuclease activity, creating a 'clean' DSB with 5'-phosphate termini that are ready for ligation (PubMed:27099339, PubMed:27060144). Thereby, protects the transcription of many genes involved in neurological development and maintenance from the abortive activity of TOP2. Hydrolyzes 5'-phosphoglycolates on protruding 5' ends on DSBs due to DNA damage by radiation and free radicals. Has preference for single-stranded DNA or duplex DNA with a 4 base pair overhang as substrate. Acts as a regulator of ribosome biogenesis following stress. Has also 3'-tyrosyl DNA phosphodiesterase activity, but less efficiently and much slower than TDP1. Constitutes the major if not only 5'-tyrosyl-DNA phosphodiesterase in cells. Also acts as an adapter by participating in the specific activation of MAP3K7/TAK1 in response to TGF-beta: associates with components of the TGF-beta receptor-TRAF6-TAK1 signaling module and promotes their ubiquitination dependent complex formation. Involved in non-canonical TGF-beta induced signaling routes. May also act as a negative regulator of ETS1 and may inhibit NF-kappa-B activation.
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Uniprot ID
Primary ID:
O95551

Secondarily ID:
B4DKL8
B4DQ95
Q2TBE2
Q5JYM0
Q7Z6U5
Q9NUK5
Q9NYY9
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Ensembl ID
ENSG00000111802
HGNC ID
HGNC:17768
Subcellular Location
Nucleus
Nucleus
PML body
Nucleus
Nucleolus
Cytoplasm
Map of Molecular Bioactivity Related to the Protein
Map of Molecular Bioactivity Related to the Protein

Protein
Cell Line
Compound

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Protein
Cell Line ID: CL000302 , DT40
Compound ID Compound Name Compound Formula
CP0108491
N-[4-(1,3-dioxo-4H-isoquinolin-6-yl)phenyl]methanesulfonamide
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C16H14N2O4S
 1
1
IC50 = 2200 nM
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CP0121880
8-iodo-4H-isoquinoline-1,3-dione
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C9H6INO2
 1
1
IC50 = 2600 nM
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CP0304434
6-[4-(trifluoromethyl)phenyl]-4H-isoquinoline-1,3-dione
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C16H10F3NO2
 1
1
IC50 = 2700 nM
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CP0108478
7-(3-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1
IC50 = 3200 nM
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CP0074684
6-(3-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1
IC50 = 3300 nM
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CP0305587
6-(trifluoromethyl)-4H-isoquinoline-1,3-dione
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C10H6F3NO2
 1
1
IC50 = 3500 nM
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CP0508799
6-(3-fluoro-4-methoxyphenyl)-4H-isoquinoline-1,3-dione
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C16H12FNO3
 1
1
IC50 = 4300 nM
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CP0279782
6-(4-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1
IC50 = 4500 nM
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CP0549051
1,3-dioxo-4H-isoquinoline-7-carboxylic acid
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C10H7NO4
 1
1
IC50 = 5200 nM
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CP0279780
6-(3-chloro-4-fluorophenyl)-4H-isoquinoline-1,3-dione
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C15H9ClFNO2
 1
1
IC50 = 5300 nM
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CP0250611
6-(2,4-difluorophenyl)-4H-isoquinoline-1,3-dione
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C15H9F2NO2
 1
1
IC50 = 5500 nM
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CP0098415
6-(3-bromophenyl)-4H-isoquinoline-1,3-dione
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C15H10BrNO2
 1
1
IC50 = 6500 nM
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CP0098418
6-iodo-4H-isoquinoline-1,3-dione
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C9H6INO2
 1
1
IC50 = 9300 nM
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CP0108467
6-(1,3-benzothiazol-2-yl)-4H-isoquinoline-1,3-dione
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C16H10N2O2S
 1
1
IC50 = 11000 nM
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CP0098417
6-(3-acetylphenyl)-4H-isoquinoline-1,3-dione
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C17H13NO3
 1
1
IC50 = 15000 nM
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CP0108494
6-pyridin-3-yl-4H-isoquinoline-1,3-dione
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C14H10N2O2
 1
1
IC50 = 23000 nM
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CP0108496
6-(furan-2-yl)-4H-isoquinoline-1,3-dione
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C13H9NO3
 1
1
IC50 = 25000 nM
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CP0250633
6-(3-nitrophenyl)-4H-isoquinoline-1,3-dione
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C15H10N2O4
 1
1
IC50 = 25000 nM
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CP0307607
N-[3-(1,3-dioxo-4H-isoquinolin-6-yl)phenyl]methanesulfonamide
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C16H14N2O4S
 1
1
IC50 = 25000 nM
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CP0304436
6-(3-hydroxyphenyl)-4H-isoquinoline-1,3-dione
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C15H11NO3
 1
1
IC50 = 35000 nM
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CP0067461
6-(4-aminophenyl)-4H-isoquinoline-1,3-dione
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C15H12N2O2
 1
1
IC50 = 40000 nM
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CP0307726
3-(1,3-dioxo-4H-isoquinolin-6-yl)benzoic acid
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C16H11NO4
 1
1
IC50 = 42000 nM
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CP0121929
7-(furan-2-yl)-4H-isoquinoline-1,3-dione
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C13H9NO3
 1
1
IC50 = 50000 nM
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CP0098428
6-(3-aminophenyl)-4H-isoquinoline-1,3-dione
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C15H12N2O2
 1
1
IC50 = 55000 nM
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Biochemical Assays
Compound ID Compound Name Compound Formula
CP0108478
7-(3-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1 IC50 = 1700 nM
CP0108491
N-[4-(1,3-dioxo-4H-isoquinolin-6-yl)phenyl]methanesulfonamide
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C16H14N2O4S
 1
1 IC50 = 1900 nM
CP0508799
6-(3-fluoro-4-methoxyphenyl)-4H-isoquinoline-1,3-dione
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C16H12FNO3
 1
1 IC50 = 3000 nM
CP0549051
1,3-dioxo-4H-isoquinoline-7-carboxylic acid
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C10H7NO4
 1
1 IC50 = 3000 nM
CP0304434
6-[4-(trifluoromethyl)phenyl]-4H-isoquinoline-1,3-dione
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C16H10F3NO2
 1
1 IC50 = 3200 nM
CP0279780
6-(3-chloro-4-fluorophenyl)-4H-isoquinoline-1,3-dione
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C15H9ClFNO2
 1
1 IC50 = 4100 nM
CP0250611
6-(2,4-difluorophenyl)-4H-isoquinoline-1,3-dione
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C15H9F2NO2
 1
1 IC50 = 4500 nM
CP0108467
6-(1,3-benzothiazol-2-yl)-4H-isoquinoline-1,3-dione
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C16H10N2O2S
 1
1 IC50 = 5100 nM
CP0098417
6-(3-acetylphenyl)-4H-isoquinoline-1,3-dione
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C17H13NO3
 1
1 IC50 = 5500 nM
CP0074684
6-(3-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1 IC50 = 5600 nM
CP0279782
6-(4-chlorophenyl)-4H-isoquinoline-1,3-dione
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C15H10ClNO2
 1
1 IC50 = 6400 nM
CP0305587
6-(trifluoromethyl)-4H-isoquinoline-1,3-dione
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C10H6F3NO2
 1
1 IC50 = 7000 nM
CP0121880
8-iodo-4H-isoquinoline-1,3-dione
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C9H6INO2
 1
1 IC50 = 7500 nM
CP0098418
6-iodo-4H-isoquinoline-1,3-dione
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C9H6INO2
 1
1 IC50 = 7600 nM
CP0098415
6-(3-bromophenyl)-4H-isoquinoline-1,3-dione
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C15H10BrNO2
 1
1 IC50 = 8000 nM
CP0108496
6-(furan-2-yl)-4H-isoquinoline-1,3-dione
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C13H9NO3
 1
1 IC50 = 10000 nM
CP0250633
6-(3-nitrophenyl)-4H-isoquinoline-1,3-dione
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C15H10N2O4
 1
1 IC50 = 10000 nM
CP0121929
7-(furan-2-yl)-4H-isoquinoline-1,3-dione
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C13H9NO3
 1
1 IC50 = 13000 nM
CP0304436
6-(3-hydroxyphenyl)-4H-isoquinoline-1,3-dione
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C15H11NO3
 1
1 IC50 = 13000 nM
CP0108494
6-pyridin-3-yl-4H-isoquinoline-1,3-dione
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C14H10N2O2
 1
1 IC50 = 16000 nM
CP0307607
N-[3-(1,3-dioxo-4H-isoquinolin-6-yl)phenyl]methanesulfonamide
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C16H14N2O4S
 1
1 IC50 = 18000 nM
CP0307726
3-(1,3-dioxo-4H-isoquinolin-6-yl)benzoic acid
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C16H11NO4
 1
1 IC50 = 21000 nM
CP0067461
6-(4-aminophenyl)-4H-isoquinoline-1,3-dione
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C15H12N2O2
 1
1 IC50 = 36000 nM
CP0098428
6-(3-aminophenyl)-4H-isoquinoline-1,3-dione
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C15H12N2O2
 1
1 IC50 = 42000 nM
Clinical Information about the Protein
Target 1 ( Tyrosyl-DNA phosphodiesterase 2 (TDP2) )
Target Type Literature-reported Target