General Information of the Compound
Compound ID
CP0396218
Compound Name
(2S)-6-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-3-(4-aminophenyl)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-1-[(2S)-2,6-diaminohexanoyl]pyrrolidine-2-carbonyl]amino]-3-methylbutanoyl]amino]-3-hydroxypropanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxypropanoyl]amino]propanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-hydroxypropanoyl]amino]propanoyl]amino]-2-[[(3R,6S,9S,12S,15R,20R,23S,26S,29S,32S)-3,6-bis(4-aminobutyl)-15-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-5-carbamimidamidopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-naphthalen-2-ylpropanoyl]amino]-9,23,26-tris(3-carbamimidamidopropyl)-12,29-bis[(4-hydroxyphenyl)methyl]-2,5,8,11,14,22,25,28,31-nonaoxo-17,18-dithia-1,4,7,10,13,21,24,27,30-nonazabicyclo[30.3.0]pentatriacontane-20-carbonyl]amino]hexanoic acid
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Structure
Formula
C139H223N47O30S2
Molecular Weight
3096.746
Canonical SMILES
CC(C)C[C@H](NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](N)CCCCN)C(C)C)C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1ccc(N)cc1)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CO)C(=O)N[C@@H](C)C(=O)NCCCC[C@H](NC(=O)[C@@H]1CSSC[C@H](NC(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@@H](N)CCCNC(N)=N)C(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](CCCCN)C(=O)N2CCC[C@H]2C(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N1)C(O)=O
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InChI
InChI=1S/C139H223N47O30S2/c1-75(2)64-97(174-125(207)104(72-189)181-130(212)109(76(3)4)184-129(211)108-37-22-62-185(108)131(213)88(145)26-8-12-52-140)118(200)180-103(71-188)124(206)176-98(66-78-39-46-84(143)47-40-78)119(201)171-93(34-20-60-163-138(154)155)116(198)179-102(70-187)123(205)165-77(5)110(192)158-55-15-11-30-96(133(215)216)173-126(208)105-73-217-218-74-106(183-122(204)101(69-81-38-45-82-24-6-7-25-83(82)65-81)175-115(197)90(31-17-57-160-135(148)149)166-111(193)87(144)27-16-56-159-134(146)147)127(209)177-99(67-79-41-48-85(190)49-42-79)120(202)169-91(32-18-58-161-136(150)151)112(194)167-89(28-9-13-53-141)114(196)172-95(29-10-14-54-142)132(214)186-63-23-36-107(186)128(210)178-100(68-80-43-50-86(191)51-44-80)121(203)170-92(33-19-59-162-137(152)153)113(195)168-94(117(199)182-105)35-21-61-164-139(156)157/h6-7,24-25,38-51,65,75-77,87-109,187-191H,8-23,26-37,52-64,66-74,140-145H2,1-5H3,(H,158,192)(H,165,205)(H,166,193)(H,167,194)(H,168,195)(H,169,202)(H,170,203)(H,171,201)(H,172,196)(H,173,208)(H,174,207)(H,175,197)(H,176,206)(H,177,209)(H,178,210)(H,179,198)(H,180,200)(H,181,212)(H,182,199)(H,183,204)(H,184,211)(H,215,216)(H4,146,147,159)(H4,148,149,160)(H4,150,151,161)(H4,152,153,162)(H4,154,155,163)(H4,156,157,164)/t77-,87-,88-,89-,90-,91-,92-,93-,94-,95+,96-,97-,98-,99-,100-,101-,102-,103-,104-,105-,106-,107-,108-,109-/m0/s1
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InChIKey
XHUDJYJBTREIEK-ZNJXPDDDSA-N
Physicochemical Property
logP
-11.13198
Rotatable Bonds
82
Heavy Atom Count
218
Polar Areas
1317.69
Hydrogen Bond Donor Count
51
Hydrogen Bond Acceptor Count
43
Complexity
218

"RO5" indicates the cutoff set by lipinski's rule of five:

(1) Molecular weight less than 500 Dalton;

(2) xlogp less than 5;

(3) No more than 5 hbonddonor (Hydrogen Bond Donor Count);

(4) No more than 10 hbondacc (Hydrogen Bond Acceptor Count);

(5) No more than 10 rotbonds (Rotatable Bond Count).

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PubChem ID
CID: 134146914
ChEMBL ID
CHEMBL3949729
Map of Molecular Bioactivity Related to the Compound
Map of Molecular Bioactivity Related to the Compound

Compound
Cell Line
Protein

Bioactivity Value:

<= 0.1 μM
> 0.1 μM and <= 10 μM
> 10 μM
Imprecise Activity
Table of Molecular Bioactivities Related to the Compound
Protein ID: PT02059, C-X-C chemokine receptor type 4
Cell-based Assay
Cell Line ID Cell Line Name Cell Line Organism
CL000651 Reh Homo sapiens (Human)  1
1
Activity = 10 nM
   TI
   LI
   LO
   TS
CL000006 HEK293 Homo sapiens (Human)  2
1
EC50 = 83 nM
   TI
   LI
   LO
   TS
2
IC50 = 94 nM
   TI
   LI
   LO
   TS